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Sequences
Taxonomy
MethanoGram
Phylogeny
Homology
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Blastn
Blastp
Blastx
TBlastn
TBlastx
Blastp
Amino acid sequence ⇒ Amino acid database
Query sequence
Database
Protein genes - amino acid sequences
Expect threshold (E-value)
Word size
Scoring Matrix
-- Matrix --
PAM 30
PAM 70
PAM 250
BLOSUM45
BLOSUM50
BLOSUM62
BLOSUM80
BLOSUM90
Gap opening penalty score
Gap extension penalty score
Filtering low complexity regions
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